/*
* MergeSort.java
*
* Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard
*
* This file is part of BEAST.
* See the NOTICE file distributed with this work for additional
* information regarding copyright ownership and licensing.
*
* BEAST is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* BEAST is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with BEAST; if not, write to the
* Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
* Boston, MA 02110-1301 USA
*/
package dr.util;
/**
* An implementation of MergeSort, needs to be subclassed to
* compare the terms.
*
* @author Scott Violet
*/
public abstract class MergeSort {
protected Object toSort[];
protected Object swapSpace[];
public void sort(Object array[]) {
if(array != null && array.length > 1)
{
int maxLength;
maxLength = array.length;
swapSpace = new Object[maxLength];
toSort = array;
this.mergeSort(0, maxLength - 1);
swapSpace = null;
toSort = null;
}
}
public abstract int compareElementsAt(int beginLoc, int endLoc);
protected void mergeSort(int begin, int end) {
if(begin != end)
{
int mid;
mid = (begin + end) / 2;
this.mergeSort(begin, mid);
this.mergeSort(mid + 1, end);
this.merge(begin, mid, end);
}
}
protected void merge(int begin, int middle, int end) {
int firstHalf, secondHalf, count;
firstHalf = count = begin;
secondHalf = middle + 1;
while((firstHalf <= middle) && (secondHalf <= end))
{
if(this.compareElementsAt(secondHalf, firstHalf) < 0)
swapSpace[count++] = toSort[secondHalf++];
else
swapSpace[count++] = toSort[firstHalf++];
}
if(firstHalf <= middle)
{
while(firstHalf <= middle)
swapSpace[count++] = toSort[firstHalf++];
}
else
{
while(secondHalf <= end)
swapSpace[count++] = toSort[secondHalf++];
}
for(count = begin;count <= end;count++)
toSort[count] = swapSpace[count];
}
}