/* * NormalPotentialDerivativeParser.java * * Copyright (c) 2002-2017 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.inferencexml.hmc; import dr.inference.hmc.NormalPotentialDerivative; import dr.inference.model.Parameter; import dr.xml.*; /** * @author Max Tolkoff */ @Deprecated public class NormalPotentialDerivativeParser extends AbstractXMLObjectParser{ public static final String NORMAL_POTENTIAL_DERIVATIVE = "normalPotentialDerivative"; public static final String MEAN = "mean"; public static final String STDEV = "stdev"; @Override public String getParserName() { return NORMAL_POTENTIAL_DERIVATIVE; } @Override public Object parseXMLObject(XMLObject xo) throws XMLParseException { Parameter parameter = (Parameter) xo.getChild(Parameter.class); double mean = xo.getDoubleAttribute(MEAN); double stdev = xo.getDoubleAttribute(STDEV); return new NormalPotentialDerivative(mean, stdev, parameter); } @Override public XMLSyntaxRule[] getSyntaxRules() { return rules; } private final XMLSyntaxRule[] rules = { AttributeRule.newDoubleRule(MEAN), AttributeRule.newDoubleRule(STDEV), new ElementRule(Parameter.class), }; @Override public String getParserDescription() { return null; } @Override public Class getReturnType() { return NormalPotentialDerivative.class; } }