/* * MeanStatistic.java * * Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.inference.model; import java.util.ArrayList; import java.util.List; /** * @version $Id: MeanStatistic.java,v 1.9 2005/05/24 20:26:00 rambaut Exp $ * * @author Andrew Rambaut * @author Alexei Drummond */ public class MeanStatistic extends Statistic.Abstract { public MeanStatistic(String name) { super(name); } public void addStatistic(Statistic statistic) { statistics.add(statistic); } public int getDimension() { return 1; } /** @return mean of contained statistics */ public double getStatisticValue(int dim) { double sum = 0.0; int dimensionCount = 0; int n; for (Statistic statistic : statistics) { n = statistic.getDimension(); for (int j = 0; j < n; j++) { sum += statistic.getStatisticValue(j); } dimensionCount += n; } return sum / dimensionCount; } // **************************************************************** // Private and protected stuff // **************************************************************** private List<Statistic> statistics = new ArrayList<Statistic>(); }