/*
* MigrationModel.java
*
* Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard
*
* This file is part of BEAST.
* See the NOTICE file distributed with this work for additional
* information regarding copyright ownership and licensing.
*
* BEAST is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* BEAST is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with BEAST; if not, write to the
* Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
* Boston, MA 02110-1301 USA
*/
package dr.evomodel.coalescent.structure;
import dr.evolution.colouring.ColourChangeMatrix;
import dr.inference.model.AbstractModel;
import dr.inference.model.Model;
/**
* @version $Id: MigrationModel.java,v 1.3 2006/09/08 14:28:07 rambaut Exp $
*
* @author Andrew Rambaut
* @author Alexei Drummond
*/
public abstract class MigrationModel extends AbstractModel
{
public MigrationModel(String name) { super(name); }
// general functions
public abstract ColourChangeMatrix getMigrationMatrix();
public abstract double[] getMigrationRates(double time);
// **************************************************************
// Model IMPLEMENTATION
// **************************************************************
protected void handleModelChangedEvent(Model model, Object object, int index) {
// no intermediates need to be recalculated...
}
protected void storeState() {} // no additional state needs storing
protected void restoreState() {} // no additional state needs restoring
protected void acceptState() {} // no additional state needs accepting
}