/*
* BayesianSkylinePopSizeStatisticParser.java
*
* Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard
*
* This file is part of BEAST.
* See the NOTICE file distributed with this work for additional
* information regarding copyright ownership and licensing.
*
* BEAST is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* BEAST is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with BEAST; if not, write to the
* Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
* Boston, MA 02110-1301 USA
*/
package dr.evomodelxml.coalescent;
import dr.evomodel.coalescent.BayesianSkylineLikelihood;
import dr.evomodel.coalescent.BayesianSkylinePopSizeStatistic;
import dr.xml.AbstractXMLObjectParser;
import dr.xml.XMLObject;
import dr.xml.XMLParseException;
import dr.xml.XMLSyntaxRule;
/**
*/
public class BayesianSkylinePopSizeStatisticParser extends AbstractXMLObjectParser {
public static final String TIME = "time";
public static final String BAYESIAN_SKYLINE_POP_SIZE_STATISTIC = "generalizedSkylinePopSizeStatistic";
public String getParserDescription() {
return "The pop sizes at the given times";
}
public Class getReturnType() {
return BayesianSkylinePopSizeStatistic.class;
}
public XMLSyntaxRule[] getSyntaxRules() {
return null;
}
public Object parseXMLObject(XMLObject xo) throws XMLParseException {
double time = xo.getDoubleAttribute(TIME);
BayesianSkylineLikelihood bsl =
(BayesianSkylineLikelihood) xo.getChild(BayesianSkylineLikelihood.class);
return new BayesianSkylinePopSizeStatistic(time, bsl);
}
public String getParserName() {
return BAYESIAN_SKYLINE_POP_SIZE_STATISTIC;
}
}