/* * SkewNormalDistributionModelParser.java * * Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.inferencexml.distribution; import dr.inference.distribution.ParametricDistributionModel; import dr.inference.distribution.SkewNormalDistributionModel; import dr.inference.model.Parameter; /** * @author Marc A. Suchard */ public class SkewNormalDistributionModelParser extends DistributionModelParser { public static final String LOCATION = "location"; public static final String SCALE = "scale"; public static final String SHAPE = "shape"; public String getParserName() { return SkewNormalDistributionModel.SKEW_NORMAL_DISTRIBUTION_MODEL; } ParametricDistributionModel parseDistributionModel(Parameter[] parameters, double offset) { return new SkewNormalDistributionModel(parameters[0], parameters[1], parameters[2]); } public String[] getParameterNames() { return new String[]{LOCATION, SCALE, SHAPE}; } public String getParserDescription() { return "A model of a skew normal distribution."; } public boolean allowOffset() { return false; } public Class getReturnType() { return SkewNormalDistributionModel.class; } }