/*
* EmpiricalTreeDistributionOperator.java
*
* Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard
*
* This file is part of BEAST.
* See the NOTICE file distributed with this work for additional
* information regarding copyright ownership and licensing.
*
* BEAST is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* BEAST is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with BEAST; if not, write to the
* Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
* Boston, MA 02110-1301 USA
*/
package dr.evomodel.operators;
import dr.inference.operators.SimpleMCMCOperator;
import dr.evomodel.tree.EmpiricalTreeDistributionModel;
/**
* @author Andrew Rambaut
* @version $Id$
*/
public class EmpiricalTreeDistributionOperator extends SimpleMCMCOperator {
public static final String EMPIRICAL_TREE_DISTRIBUTION_OPERATOR = "empiricalTreeDistributionOperator";
public static final String METROPOLIS_HASTINGS = "metropolisHastings";
private final EmpiricalTreeDistributionModel treeModel;
private final boolean metropolisHastings;
public EmpiricalTreeDistributionOperator(EmpiricalTreeDistributionModel treeModel, boolean metropolisHastings, double weight) {
this.treeModel = treeModel;
setWeight(weight);
this.metropolisHastings = metropolisHastings;
}
// IMPLEMENTATION: SimpleMCMCOperator
// =========================================
public double doOperation() {
treeModel.drawTreeIndex();
if (metropolisHastings) {
return 0.0;
}
// if not MetropolisHastings, always accept these moves...
return Double.POSITIVE_INFINITY;
}
public String getPerformanceSuggestion() {
return "";
}
public String getOperatorName() {
return EMPIRICAL_TREE_DISTRIBUTION_OPERATOR;
}
}