/*
* DirichletProcessPriorLoggerParser.java
*
* Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard
*
* This file is part of BEAST.
* See the NOTICE file distributed with this work for additional
* information regarding copyright ownership and licensing.
*
* BEAST is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* BEAST is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with BEAST; if not, write to the
* Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
* Boston, MA 02110-1301 USA
*/
package dr.evomodel.branchmodel.lineagespecific;
import dr.inference.model.CompoundParameter;
import dr.inference.model.Parameter;
import dr.xml.AbstractXMLObjectParser;
import dr.xml.XMLObject;
import dr.xml.XMLParseException;
import dr.xml.XMLSyntaxRule;
public class DirichletProcessPriorLoggerParser extends AbstractXMLObjectParser {
public static final String DPP_LOGGER = "dppLogger";
public static final String PRECISION = "precision";
@Override
public Object parseXMLObject(XMLObject xo) throws XMLParseException {
// ParametricMultivariateDistributionModel baseModel = (ParametricMultivariateDistributionModel) xo.getChild(ParametricMultivariateDistributionModel.class);
Parameter precisionParameter = (Parameter)xo.getElementFirstChild(PRECISION);
CompoundParameter uniquelyRealizedParameters = (CompoundParameter)xo.getChild(CompoundParameter.class);
Parameter categoriesParameter = (Parameter)xo.getElementFirstChild(DirichletProcessPriorParser.CATEGORIES);
return new DirichletProcessPriorLogger(precisionParameter, categoriesParameter, uniquelyRealizedParameters);
}// END: parseXMLObject
@Override
public XMLSyntaxRule[] getSyntaxRules() {
// TODO Auto-generated method stub
return null;
}
@Override
public String getParserName() {
return DPP_LOGGER;
}
@Override
public String getParserDescription() {
return DPP_LOGGER;
}
@Override
public Class getReturnType() {
return DirichletProcessPriorLogger.class;
}
}// END: class