/*
* DifferenceMatrixParameterParser.java
*
* Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard
*
* This file is part of BEAST.
* See the NOTICE file distributed with this work for additional
* information regarding copyright ownership and licensing.
*
* BEAST is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* BEAST is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with BEAST; if not, write to the
* Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
* Boston, MA 02110-1301 USA
*/
package dr.inferencexml.model;
/**
* Created by max on 4/23/15.
*/
import dr.inference.model.DifferenceMatrixParameter;
import dr.inference.model.MatrixParameter;
import dr.inference.model.Parameter;
import dr.xml.AbstractXMLObjectParser;
import dr.xml.XMLObject;
import dr.xml.XMLParseException;
import dr.xml.XMLSyntaxRule;
public class DifferenceMatrixParameterParser extends AbstractXMLObjectParser {
public static final String DIFFERENCE_MATRIX_PARAMETER = "differenceMatrixParameter";
public static final String PARAMETER1 = "parameter1";
public static final String PARAMETER2 = "parameter2";
@Override
public String getParserName() {
return DIFFERENCE_MATRIX_PARAMETER;
}
@Override
public Object parseXMLObject(XMLObject xo) throws XMLParseException {
Parameter parameter1 = (Parameter) xo.getElementFirstChild(PARAMETER1);
Parameter parameter2 = (Parameter) xo.getElementFirstChild(PARAMETER2);
// if(parameter1.getDimension() != parameter2.getDimension()){
// throw new XMLParseException("Parameters in ratio '" + xo.getId() + "' must have the same dimension");
// }
return new DifferenceMatrixParameter(parameter1, parameter2);
}//END: parseXMLObject
@Override
public XMLSyntaxRule[] getSyntaxRules() {
//TODO
return null;
}
@Override
public String getParserDescription() {
return DIFFERENCE_MATRIX_PARAMETER;
}
@Override
public Class getReturnType() {
return Parameter.class;
}
}//END: class