/* * MatrixVectorProductParameterParser.java * * Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.inferencexml.model; import dr.inference.model.MatrixParameter; import dr.inference.model.MatrixVectorProductParameter; import dr.inference.model.Parameter; import dr.xml.*; /** * @author Marc A. Suchard */ public class MatrixVectorProductParameterParser extends AbstractXMLObjectParser { public static final String PRODUCT_PARAMETER = "matrixVectorProductParameter"; public static final String MATRIX = "matrix"; public static final String VECTOR = "vector"; public Object parseXMLObject(XMLObject xo) throws XMLParseException { MatrixParameter matrix = (MatrixParameter) xo.getChild(MATRIX).getChild(MatrixParameter.class); Parameter vector = (Parameter) xo.getChild(VECTOR).getChild(Parameter.class); if (matrix.getColumnDimension() != vector.getDimension()) { throw new XMLParseException("Wrong matrix-vector dimensions in " + xo.getId()); } return new MatrixVectorProductParameter(matrix, vector); } public XMLSyntaxRule[] getSyntaxRules() { return rules; } private final XMLSyntaxRule[] rules = { new ElementRule(MATRIX, new XMLSyntaxRule[]{ new ElementRule(MatrixParameter.class), }), new ElementRule(VECTOR, new XMLSyntaxRule[]{ new ElementRule(Parameter.class), }), }; public String getParserDescription() { return "A matrix-vector product of parameters."; } public Class getReturnType() { return MatrixVectorProductParameter.class; } public String getParserName() { return PRODUCT_PARAMETER; } }