/* * ParameterChooserParser.java * * Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.inference.model; import dr.xml.*; /** * @author Joseph Heled * Date: 4/09/2009 */ public class ParameterChooserParser extends dr.xml.AbstractXMLObjectParser { public static String VARIABLE_SELECTOR = "variableSelector"; public static String INDEX = "index"; public Object parseXMLObject(XMLObject xo) throws XMLParseException { String name = xo.getId(); final ValuesPool pool = (ValuesPool) xo.getChild(ValuesPool.class); final int[] which = xo.getIntegerArrayAttribute(INDEX); for( int w : which ) { if( ! (0 <= w && w < pool.length()) ) { throw new XMLParseException("index " + w + " out of range"); } } return new ParameterChooser(name, pool, which); } public XMLSyntaxRule[] getSyntaxRules() { return new XMLSyntaxRule[] { new ElementRule(ValuesPool.class,1,1), AttributeRule.newIntegerArrayRule(INDEX, false), }; } public String getParserDescription() { return ""; } public Class getReturnType() { return ParameterChooser.class; } public String getParserName() { return VARIABLE_SELECTOR; } }