/* * ProductStatisticParser.java * * Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.inferencexml.model; import dr.inference.model.ProductStatistic; import dr.inference.model.Statistic; import dr.xml.*; /** */ public class ProductStatisticParser extends AbstractXMLObjectParser { public static String PRODUCT_STATISTIC = "productStatistic"; public static String PRODUCT = "product"; public static String ELEMENT_WISE = "elementwise"; public String[] getParserNames() { return new String[]{getParserName(), PRODUCT}; } public String getParserName() { return PRODUCT_STATISTIC; } public Object parseXMLObject(XMLObject xo) throws XMLParseException { boolean elementwise = xo.getAttribute(ELEMENT_WISE, false); String name = PRODUCT_STATISTIC; if (xo.hasAttribute(Statistic.NAME)) { name = xo.getAttribute(Statistic.NAME, xo.getId()); } else if (xo.hasAttribute(XMLParser.ID)) { name = xo.getAttribute(XMLParser.ID, xo.getId()); } ProductStatistic productStatistic = new ProductStatistic(name, elementwise); for (int i = 0; i < xo.getChildCount(); i++) { Object child = xo.getChild(i); if (child instanceof Statistic) { try { productStatistic.addStatistic((Statistic) child); } catch (IllegalArgumentException iae) { throw new XMLParseException("Statistic added to " + getParserName() + " element is not of the same dimension"); } } else { throw new XMLParseException("Unknown element found in " + getParserName() + " element:" + child); } } return productStatistic; } //************************************************************************ // AbstractXMLObjectParser implementation //************************************************************************ public String getParserDescription() { return "This element returns a statistic that is the product of the child statistics."; } public Class getReturnType() { return ProductStatistic.class; } public XMLSyntaxRule[] getSyntaxRules() { return rules; } private final XMLSyntaxRule[] rules = { AttributeRule.newBooleanRule(ELEMENT_WISE, true), AttributeRule.newStringRule(Statistic.NAME, true), new ElementRule(Statistic.class, 1, Integer.MAX_VALUE) }; }