/*
* CoercableMCMCOperator.java
*
* Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard
*
* This file is part of BEAST.
* See the NOTICE file distributed with this work for additional
* information regarding copyright ownership and licensing.
*
* BEAST is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* BEAST is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with BEAST; if not, write to the
* Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
* Boston, MA 02110-1301 USA
*/
package dr.inference.operators;
/**
* An MCMC operator that can be coerced to produce a target acceptance probability.
*
* @author Alexei Drummond
* @author Andrew Rambaut
* @version $Id: CoercableMCMCOperator.java,v 1.3 2005/05/24 20:26:00 rambaut Exp $
*/
public interface CoercableMCMCOperator extends MCMCOperator {
public static final String AUTO_OPTIMIZE = "autoOptimize";
/**
* A coercable parameter must have a range from -infinity to +infinity with a preference for
* small numbers.
* <p/>
* If operator acceptance is too high, BEAST increases the parameter; if operator acceptance is
* too low, BEAST decreases the parameter.
* <p/>
* From MarkovChain.coerceAcceptanceProbability:
* <p/>
* new parameter = old parameter + 1/(1+N) * (current-step acceptance probability - target probabilitity),
* <p/>
* where N is some function of the number of operator trials.
*
* @return a "coercable" parameter
*/
double getCoercableParameter();
/**
* Sets the coercable parameter value. A coercable parameter must have a range from -infinity to +infinity with a preference for
* small numbers.
*
* @param value the value to set the coercible parameter to
*/
void setCoercableParameter(double value);
/**
* @return the underlying tuning parameter value
*/
double getRawParameter();
/**
* @return the mode of this operator.
*/
CoercionMode getMode();
}