/* * AlloppMoveLegs.java * * Copyright (c) 2002-2017 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.evomodel.alloppnet.operators; import dr.evomodel.alloppnet.speciation.AlloppSpeciesBindings; import dr.evomodel.alloppnet.speciation.AlloppSpeciesNetworkModel; import dr.evomodel.alloppnet.parsers.AlloppMoveLegsParser; import dr.inference.operators.SimpleMCMCOperator; /** * * @author Graham Jones * Date: 31/08/2011 */ // 2012-07 ood public class AlloppMoveLegs extends SimpleMCMCOperator { private final AlloppSpeciesNetworkModel apspnet; private final AlloppSpeciesBindings apsp; public AlloppMoveLegs(AlloppSpeciesNetworkModel apspnet, AlloppSpeciesBindings apsp, double weight) { this.apspnet = apspnet; this.apsp = apsp; setWeight(weight); } public String getPerformanceSuggestion() { return "None"; } @Override public String getOperatorName() { return AlloppMoveLegsParser.MOVE_LEGS + "(" + apspnet.getId() + "," + apsp.getId() + ")"; } @Override public double doOperation() { apspnet.beginNetworkEdit(); apspnet.moveLegs(); apspnet.endNetworkEdit(); return 0; } }