/*
* CachedDistributionLikelihood.java
*
* Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard
*
* This file is part of BEAST.
* See the NOTICE file distributed with this work for additional
* information regarding copyright ownership and licensing.
*
* BEAST is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* BEAST is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with BEAST; if not, write to the
* Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
* Boston, MA 02110-1301 USA
*/
package dr.inference.distribution;
import dr.inference.model.AbstractModelLikelihood;
import dr.inference.model.Model;
import dr.inference.model.Parameter;
import dr.inference.model.Variable;
/**
* @author Marc Suchard
*/
public class CachedDistributionLikelihood extends AbstractModelLikelihood {
public CachedDistributionLikelihood(String name, AbstractDistributionLikelihood likelihood, Variable variable) {
super(name);
this.likelihood = likelihood;
addVariable(variable);
}
protected void handleModelChangedEvent(Model model, Object object, int index) {
likelihoodKnown = false;
}
protected void handleVariableChangedEvent(Variable variable, int index, Parameter.ChangeType type) {
likelihoodKnown = false;
}
protected void storeState() {
storedLikelihoodKnow = likelihoodKnown;
storedLogLikelihood = logLikelihood;
}
protected void restoreState() {
likelihoodKnown = storedLikelihoodKnow;
logLikelihood = storedLogLikelihood;
}
protected void acceptState() {
}
public AbstractDistributionLikelihood getDistributionLikelihood() { return likelihood; }
public Model getModel() {
return this;
}
public double getLogLikelihood() {
if (!likelihoodKnown) {
logLikelihood = calculateLogLikelihood();
likelihoodKnown = true;
}
return logLikelihood;
}
private double calculateLogLikelihood() {
return likelihood.calculateLogLikelihood();
}
public void makeDirty() {
likelihoodKnown = false;
}
private boolean likelihoodKnown;
private boolean storedLikelihoodKnow;
private double logLikelihood;
private double storedLogLikelihood;
private final AbstractDistributionLikelihood likelihood;
}