/* * ProductParameterParser.java * * Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.inferencexml.model; import dr.inference.model.Parameter; import dr.inference.model.ProductParameter; import dr.xml.*; import java.util.ArrayList; import java.util.List; /** */ public class ProductParameterParser extends AbstractXMLObjectParser { public static final String PRODUCT_PARAMETER = "productParameter"; public Object parseXMLObject(XMLObject xo) throws XMLParseException { List<Parameter> paramList = new ArrayList<Parameter>(); int dim = -1; for (int i = 0; i < xo.getChildCount(); ++i) { Parameter parameter = (Parameter) xo.getChild(i); if (dim == -1) { dim = parameter.getDimension(); } else { if (parameter.getDimension() != dim) { throw new XMLParseException("All parameters in product '" + xo.getId() + "' must be the same length"); } } paramList.add(parameter); } return new ProductParameter(paramList); } public XMLSyntaxRule[] getSyntaxRules() { return rules; } private final XMLSyntaxRule[] rules = { new ElementRule(Parameter.class,1,Integer.MAX_VALUE), }; public String getParserDescription() { return "A element-wise product of parameters."; } public Class getReturnType() { return Parameter.class; } public String getParserName() { return PRODUCT_PARAMETER; } }