package edu.stanford.rsl.tutorial;
import ij.ImageJ;
import edu.stanford.rsl.conrad.data.numeric.Grid2D;
import edu.stanford.rsl.tutorial.parallel.ParallelProjector2D;
import edu.stanford.rsl.tutorial.phantoms.DotsGrid2D;
import edu.stanford.rsl.tutorial.phantoms.MickeyMouseGrid2D;
import edu.stanford.rsl.tutorial.phantoms.Phantom;
import edu.stanford.rsl.tutorial.phantoms.TestObject1;
import edu.stanford.rsl.tutorial.phantoms.UniformCircleGrid2D;
/**
* Simple example that computes and displays two forward projections of a uniform circle.
* @author Recopra Seminar Summer 2012
*
*/
public class DisplaySinogram {
/**
* @param args
*/
public static void main(String[] args) {
// sinogram params
double maxTheta=Math.PI, // [rad]
deltaTheta=Math.PI/200, // [rad]
maxS=150, // [mm]
deltaS=1.0; // [mm]
// image params
int imgSzXMM = 150, // [mm]
imgSzYMM = imgSzXMM; // [mm]
float pxSzXMM = 1.0f, // [mm]
pxSzYMM = pxSzXMM; // [mm]
//float focalLength = 400, maxBeta = (float) Math.PI*2, deltaBeta = maxBeta / 200, maxT = 200, deltaT = 1;
int phantomType = 2; // 0 = circle, 1 = MickeyMouse, 2 = TestObject1,
// 3=DotsGrid
// size in grid units
int imgSzXGU = (int) Math.floor(imgSzXMM / pxSzXMM), // [GU]
imgSzYGU = (int) Math.floor(imgSzYMM / pxSzYMM); // [GU]
new ImageJ();
ParallelProjector2D projector = new ParallelProjector2D(maxTheta, deltaTheta, maxS, deltaS);
// image object
Phantom phantom;
switch (phantomType) {
case 0:
phantom = new UniformCircleGrid2D(imgSzXGU, imgSzYGU);
break;
case 1:
phantom = new MickeyMouseGrid2D(imgSzXGU, imgSzYGU);
break;
case 2:
phantom = new TestObject1(imgSzXGU, imgSzYGU);
break;
case 3:
phantom = new DotsGrid2D(imgSzXGU, imgSzYGU);
break;
default:
phantom = new UniformCircleGrid2D(imgSzXGU, imgSzYGU);
break;
}
phantom.setSpacing(pxSzXMM, pxSzYMM);
// origin is given in (negative) world coordinates
phantom.setOrigin(-(imgSzXGU * phantom.getSpacing()[0]) / 2.0,
-(imgSzYGU * phantom.getSpacing()[1]) / 2.0);
phantom.show();
Grid2D grid = phantom;
// create projections
Grid2D sinoRayCL = projector.projectRayDrivenCL(grid);
sinoRayCL.show("Sino CL Ray");
Grid2D sinoRay = projector.projectRayDriven(grid);
sinoRay.show("Sino CPU Ray");
}
}
/*
* Copyright (C) 2010-2014 Andreas Maier
* CONRAD is developed as an Open Source project under the GNU General Public License (GPL).
*/