/*
* #%L
* BSD implementations of Bio-Formats readers and writers
* %%
* Copyright (C) 2005 - 2015 Open Microscopy Environment:
* - Board of Regents of the University of Wisconsin-Madison
* - Glencoe Software, Inc.
* - University of Dundee
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
* #L%
*/
package loci.formats.utests.tiff;
import static org.testng.AssertJUnit.assertEquals;
import static org.testng.AssertJUnit.assertFalse;
import static org.testng.AssertJUnit.assertNotNull;
import static org.testng.AssertJUnit.assertTrue;
import static org.testng.AssertJUnit.fail;
import java.io.IOException;
import java.lang.reflect.Constructor;
import loci.formats.FormatException;
import loci.formats.tiff.IFD;
import loci.formats.tiff.PhotoInterp;
import loci.formats.tiff.TiffParser;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
/**
*
* @author callan
*/
@Test(groups={ "tiffParserTests" })
public class TiffParserTest {
private TiffParser tiffParser;
private BaseTiffMock mock;
@Parameters({ "mockClassName" })
@BeforeMethod
public void setUp(String mockClassName) throws Exception {
Class mockClass = Class.forName(mockClassName);
Constructor constructor = mockClass.getDeclaredConstructor();
mock = (BaseTiffMock) constructor.newInstance();
tiffParser = mock.getTiffParser();
}
@Test
public void testHeader() throws IOException {
assertTrue(tiffParser.isValidHeader());
assertTrue(tiffParser.checkHeader());
assertFalse(tiffParser.isBigTiff());
}
@Test
public void testFirstOffset() throws IOException {
assertEquals(8, tiffParser.getFirstOffset());
}
@Test
public void testGetPhotoInterp() throws IOException, FormatException {
assertEquals(PhotoInterp.RGB,
tiffParser.getFirstIFD().getPhotometricInterpretation());
}
@Test
public void testGetImageLength() throws IOException, FormatException {
assertEquals(mock.getImageLength(),
tiffParser.getFirstIFD().getImageLength());
}
@Test
public void testGetImageWidth() throws IOException, FormatException {
assertEquals(mock.getImageWidth(), tiffParser.getFirstIFD().getImageWidth());
}
@Test
public void testGetBitsPerSample() throws IOException, FormatException {
int[] bitsPerSample = tiffParser.getFirstIFD().getBitsPerSample();
assertNotNull(bitsPerSample);
assertEquals(mock.getSamplesPerPixel(), bitsPerSample.length);
int[] BITS_PER_SAMPLE = mock.getBitsPerSample();
for (int i = 0; i < BITS_PER_SAMPLE.length; i++) {
int a = BITS_PER_SAMPLE[i];
long b = bitsPerSample[i];
if (a != b) {
fail(String.format(
"Bits per sample offset %d not equivilent: %d != %d", i, a, b));
}
}
}
@Test
public void testGetSamplesPerPixel() throws IOException, FormatException {
assertEquals(mock.getSamplesPerPixel(),
tiffParser.getFirstIFD().getSamplesPerPixel());
}
@Test
public void testGetStripOffsets() throws IOException, FormatException {
long[] stripOffsets = tiffParser.getFirstIFD().getStripOffsets();
assertNotNull(stripOffsets);
int[] STRIP_OFFSETS = mock.getStripOffsets();
assertEquals(STRIP_OFFSETS.length, stripOffsets.length);
for (int i = 0; i < STRIP_OFFSETS.length; i++) {
int a = STRIP_OFFSETS[i];
long b = stripOffsets[i];
if (a != b) {
fail(String.format(
"Strip offset %d not equivilent: %d != %d", i, a, b));
}
}
}
@Test
public void testGetRowsPerStrip() throws IOException, FormatException {
long[] rowsPerStrip = tiffParser.getFirstIFD().getRowsPerStrip();
assertNotNull(rowsPerStrip);
int[] ROWS_PER_STRIP = mock.getRowsPerStrip();
assertEquals(ROWS_PER_STRIP.length, rowsPerStrip.length);
for (int i = 0; i < ROWS_PER_STRIP.length; i++) {
int a = ROWS_PER_STRIP[i];
long b = rowsPerStrip[i];
if (a != b) {
fail(String.format(
"Rows per strip %d not equivilent: %d != %d", i, a, b));
}
}
}
@Test
public void testGetXResolution() throws IOException, FormatException {
int tag = IFD.X_RESOLUTION;
assertTrue(mock.getXResolution().equals(
tiffParser.getFirstIFD().getIFDRationalValue(tag)));
}
@Test
public void testGetYResolution() throws IOException, FormatException {
int tag = IFD.Y_RESOLUTION;
assertTrue(mock.getYResolution().equals(
tiffParser.getFirstIFD().getIFDRationalValue(tag)));
}
@Test
public void testGetResolutionUnit() throws IOException, FormatException {
int tag = IFD.RESOLUTION_UNIT;
assertEquals(mock.getResolutionUnit(),
tiffParser.getFirstIFD().getIFDIntValue(tag));
}
@Test(expectedExceptions={ FormatException.class })
public void testNonUniformRowsPerStrip() throws IOException, FormatException {
mock = new NonUniformRowsPerStripMock();
tiffParser = mock.getTiffParser();
assertTrue(tiffParser.checkHeader());
tiffParser.getFirstIFD().getRowsPerStrip();
mock.close();
}
@Test
public void testBitsPerSampleMismatch() throws IOException, FormatException {
mock = new BitsPerSampleSamplesPerPixelMismatchMock();
tiffParser = mock.getTiffParser();
assertTrue(tiffParser.checkHeader());
IFD ifd = tiffParser.getFirstIFD();
int[] bitsPerSample = ifd.getBitsPerSample();
int[] mockBitsPerSample = mock.getBitsPerSample();
assertEquals(bitsPerSample.length, ifd.getSamplesPerPixel());
for (int i=0; i<mockBitsPerSample.length; i++) {
assertEquals(bitsPerSample[i], mockBitsPerSample[i]);
}
mock.close();
}
// TODO: Test wrong type exceptions
}