/* * #%L * Bio-Formats Plugins for ImageJ: a collection of ImageJ plugins including the * Bio-Formats Importer, Bio-Formats Exporter, Bio-Formats Macro Extensions, * Data Browser and Stack Slicer. * %% * Copyright (C) 2006 - 2015 Open Microscopy Environment: * - Board of Regents of the University of Wisconsin-Madison * - Glencoe Software, Inc. * - University of Dundee * %% * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 2 of the * License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public * License along with this program. If not, see * <http://www.gnu.org/licenses/gpl-2.0.html>. * #L% */ import ij.IJ; import ij.ImagePlus; import ij.io.OpenDialog; import ij.plugin.PlugIn; import java.io.IOException; import loci.formats.FormatException; import loci.plugins.BF; /** * A very simple example of using Bio-Formats in an ImageJ plugin. */ public class Simple_Read implements PlugIn { public void run(String arg) { OpenDialog od = new OpenDialog("Open Image File...", arg); String dir = od.getDirectory(); String name = od.getFileName(); String id = dir + name; try { ImagePlus[] imps = BF.openImagePlus(id); for (ImagePlus imp : imps) imp.show(); } catch (FormatException exc) { IJ.error("Sorry, an error occurred: " + exc.getMessage()); } catch (IOException exc) { IJ.error("Sorry, an error occurred: " + exc.getMessage()); } } }