// // PumpWithLightSourceSettingsTest.java // /* OME Bio-Formats package for reading and converting biological file formats. Copyright (C) 2005-@year@ UW-Madison LOCI and Glencoe Software, Inc. This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ package loci.formats.utests; import static org.testng.AssertJUnit.assertEquals; import javax.xml.parsers.DocumentBuilder; import javax.xml.parsers.DocumentBuilderFactory; import ome.xml.model.Arc; import ome.xml.model.Channel; import ome.xml.model.Image; import ome.xml.model.Instrument; import ome.xml.model.Laser; import ome.xml.model.LightSourceSettings; import ome.xml.model.OME; import ome.xml.model.OMEModel; import ome.xml.model.OMEModelImpl; import ome.xml.model.Pixels; import org.testng.annotations.BeforeClass; import org.testng.annotations.Test; import org.w3c.dom.Document; import org.w3c.dom.Element; /** * Test case which outlines the problems seen in ticket:571. * * <dl><dt><b>Source code:</b></dt> * <dd><a href="http://trac.openmicroscopy.org.uk/ome/browser/bioformats.git/components/bio-formats/test/loci/formats/utests/PumpWithLightSourceSettingsTest.java">Trac</a>, * <a href="http://git.openmicroscopy.org/?p=bioformats.git;a=blob;f=components/bio-formats/test/loci/formats/utests/PumpWithLightSourceSettingsTest.java;hb=HEAD">Gitweb</a></dd></dl> * * @author Chris Allan <callan at blackcat dot ca> */ public class PumpWithLightSourceSettingsTest { private OME ome = new OME(); @BeforeClass public void setUp() throws Exception { Instrument instrument = new Instrument(); instrument.setID("Instrument:0"); // Add a Laser with an Arc pump Laser laser = new Laser(); laser.setID("Laser:0"); Arc pump = new Arc(); pump.setID("Arc:0"); laser.linkPump(pump); instrument.addLightSource(laser); instrument.addLightSource(pump); ome.addInstrument(instrument); // Add an Image/Pixels with a LightSourceSettings reference to the Pump // on one of its channels. Image image = new Image(); image.setID("Image:0"); Pixels pixels = new Pixels(); pixels.setID("Pixels:0"); Channel channel = new Channel(); channel.setID("Channel:0"); LightSourceSettings settings = new LightSourceSettings(); settings.setID("Arc:0"); channel.setLightSourceSettings(settings); pixels.addChannel(channel); image.setPixels(pixels); ome.addImage(image); } @Test public void testLightSourceType() throws Exception { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); DocumentBuilder parser = factory.newDocumentBuilder(); Document document = parser.newDocument(); // Produce a valid OME DOM element hierarchy Element root = ome.asXMLElement(document); SPWModelMock.postProcess(root, document, false); OMEModel model = new OMEModelImpl(); ome = new OME(document.getDocumentElement(), model); model.resolveReferences(); } }